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ParameterDefaultDescription
Save output to/path/to/sequence/

The folder where the "mfold" subdirectory will be created with the output data in it. By default, this folder is the same as the folder where the input sequence is stored.

For example, let's say our OS is Windows and the analyzed sequence has the path "C:\path\to\sequence\my_sequence.fa". After running the task, the folder structure will look something like this

Code Block
C:.
└───path
    └───to
        └───sequence
            │   my_sequence.fa
            │
            └───mfold
                └───2024.03.19_16-31-34
                        inp.fa_1.pdf
                        inp.fa_1.png
                        inp.fa_2.pdf
                        inp.fa_2.png
                        inp.fa_3.pdf
                        inp.fa_3.png
                        out.html
The output folder must have write permissions.


Info

Settings are not saved between dialog calls. If you need to change the output folder to something other than the default, you will have to do this manually every time you call the dialog.

This behavior may be corrected in future releases of UGENE.

Anchor
dpi
dpi
DPI

96

Setting up the Ghostscript converter from PS files to PNG. Quality of saved images (PNG files). The higher this parameter, the higher the quality, size and resolution of the resulting images.

Info

This setting only affects images in the output folder. This setting does not affect images in the UGENE report. This setting does not affect PDF output files.

For more information about output types, see the Output data section.

Internal parameters

Settings that the user cannot explicitly influence.

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