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Select a single object with a sequence alignment in the Project View window and click the Export ‣ Export alignment to sequence format context menu item:

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     <img src="/wiki/download/attachments/4227246/Exporting Alignment to Sequence Format.png"/>
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The Convert Alignment to Separate Sequences dialog will appear:

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     <img src="/wiki/download/attachments/4227246/Exporting Alignment to Sequence Format_1.png"/>
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Here it is possible to specify the result file location, to select a sequence file format, to define whether to keep or remove gaps (‘—’ chars) in the aligned sequences and optionally add the created document to the current project.