To use this workflow input a set of sequences and set a minimum sequence length. All sequences with length less than the specified value will be filtered out. The result will be written into a FASTA file by default.
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If you haven't used the workflow samples in UGENE before, look at the "How to Use Sample Workflows" section of the documentation. |
Workflow Sample Location
The workflow sample "Filter out Short Sequences" can be found in the "Scenarios" section of the Workflow Designer samples.
Workflow Image
The opened workflow looks as follows:
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<center> <br> <img src="/wiki/download/attachments/22062045/Filter out Short Sequences.jpg"/> <br> </center> |
Workflow Wizard
The wizard has 3 pages.
Input sequence(s): On this page, input files must be set.
HTML <center> <br> <img src="/wiki/download/attachments/22062045/Filter out Short Sequences_1.jpg"/> <br> </center>
Filtering: The filtering parameters can be changed here.
HTML <center> <br> <img src="/wiki/download/attachments/22062045/Filter out Short Sequences_2.jpg"/> <br> </center>
The following parameters are available:
Minimum length Minimum sequence length
Output data: On this page, the output file can be selected:
HTML <center> <br> <img src="/wiki/download/attachments/22062045/Filter out Short Sequences_3.jpg"/> <br> </center>