Extract the consensus string from the incoming multiple sequence alignment.
...
Element type: extract-msa-consensus-string
Parameters
Parameter | Description | Default value | Parameter in Workflow File | Type |
---|---|---|---|---|
Algorithm | The algorithm of consensus extracting. |
algorithm | string | |
Threshold | The threshold of the algorithm. | 100 |
Parameters in Workflow File
Type: extract-msa-consensus-stringthreshold |
numeric |
Input/Output Ports
The element has 1 input port:
Name in GUI: in-msa
Name in Workflow File: in-msa
Slots:
Slot In GUI | Slot in Workflow File | Type |
---|---|---|
MSA | msa | msa |
And 1 output port:
Name in GUI: out-sequence
Name in Workflow File: out-text
Slots:
Slot In GUI | Slot in Workflow File | Type |
---|---|---|
Plain text | text | string |