Given a list of genes, using Bioconductor (GO, GOstats) and DAVID at NIH.
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Element type: conduct-go-id
Parameters
Parameter | Description | Default value | Parameter in Workflow File | Type |
---|---|---|---|---|
Output directory | The directory to store Conduct GO results. |
output-dir | string | |||
Title | Title is used to name the output files - so make it meaningful. | Default | title | string |
Gene Universe | Select a gene universe. | hgu133a.db |
Parameters in Workflow File
Type: conduct-go-id
string
gene-universe |
string |
Input/Output Ports
The element has 1 input port:
Name in GUI: Conduct GO data
Name in Workflow File: in-data
Slots:
Slot In GUI | Slot in Workflow File | Type |
---|---|---|
Target genes | in-ann | ann-table-list |