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To fetch sequences from remote BLAST database use Each result annotation found with the remote BLAST in UGENE has a qualifier that specifies ID of the sequence. The prompt way to fetch sequences of several annotations is the following: select the annotations in the Annotations editor, open the context menu, and choose the Fetch sequences from remote database->Fetch sequences by 'id' from 'blast result'  context menu item of the blast result. The following dialog will appear:

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  <img src="/wiki/download/attachments/7667909/Fetching Sequences from Remote Database.png"/>
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Here you need select Select an output path . After that click on the Fetchin the dialog and click the OK button.