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  • Call Variants with SAMtools Element

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The element has 2 input ports:

Name in GUI: Input assembly

Name in Workflow File: in-assembly

Slots:

Slot In GUISlot in Workflow FileType
Dataset namedatasetstring
Source urlurlstring

Name in GUI: Input sequences

Name in Schema FileWorkflow File: in-sequence

Slots:

Slot In GUISlot in Workflow FileType
Source urlurlstring

And 1 output port:

Name in GUI: Output variations

Name in Workflow File: out-variations

Slots:

Slot In GUISlot in Workflow FileType
Variation trackvariation-trackvariation