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To start working with an assembly import it to the UGENE database file. To do this, open the assembly file.

For SAM 

The Import BAM/SAM File dialog assembly file without header you need to choose a referenece sequence:

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     <img src="/wiki/download/attachments/4227509/Import BAM-SAM File.png"/>
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Select the referense sequence and click Import button.

For other assembly files the following dialog appears:

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     <img src="/wiki/download/attachments/4227509/Import BAM-SAM File_1.png"/>
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The Source URL field in the dialog specifies the file to import. The Info button nearby can be used to obtain additional information about the file.

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