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The element has 1 input port:
Name in GUI: Input sequences:
URL(s) to FASTQ or FASTA file(s) should be provided.
The input files may contain single-end reads, scaffoldscontigs, or "left" reads in case of the paired-end sequencing (see "Input data" parameter of the element).
Name in Workflow File: in
Slots:
SlotInGUI | Slot in Workflow File | Type |
---|---|---|
Input URL | url | string |
The element has 1 output port:
Name in GUI: DIAMOND Classification:
A list of sequence names with the associated taxonomy IDs, classified by DIAMOND.
Name in Workflow File: out
Slots:
SlotInGUI | Slot in Workflow File | Type |
---|---|---|
Taxonomy classification data | tax-data | tax-classification |