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Region — select the sequence range for prediction.  Region can be either a Selected region if select range before selection, Whole sequence or Custom region.

Results — the visual representation of the prediction results, for example:

<center>
     <br>
     <img src="/wiki/download/attachments/1975967865930792/Secondary Structure Prediction_1.png"/>
     <br>
</center>

Save as annotation — select this button to save the results as annotations of the current protein sequence.

<center>
     <br>
     <img src="/wiki/download/attachments/65930792/Secondary Structure Prediction_2.png"/>
     <br>
</center>

Visual representation of the predicted annotation on the sequence:

<center>
     <br>
     <img src="/wiki/download/attachments/65930792/Secondary Structure Prediction_3.png"/>
     <br>
</center>