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Select the Read alignment element. In the Parameters area of the Property Editor click on the Value column of the Input files parameter:

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And browse for an input file, e.g.Select the $UGENE\data\samples\CLUSTALW\COI.aln file.Result: The Input files value is set to the file’s path.
Select the Write alignment element and set the Output file, e.g. you can just enter result.aln.Result: All required schema parameters are set.

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