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Create the workflow, choose parameters and click the Run button. The output file is your sequence with the pattern as annotation. If you want to search pattern in many sequences you can add these sequences into Read Sequence element. After the end of the running process a report appears. The report include all information about workflow.
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For navigation between your workflows use the Dashboards Manager:
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Note that workflows in UGENE are easy to read and share, can be reused multiple times and compiled into a separate standalone command line tools!
For more detailed information about Workflow Designer use the Workflow Designer Documentation.