Query Designer Documentation v. 34
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  • Gc Content Algorithm Element
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Searches regions in a sequence with GC content in the specified range.

Parameters in GUI

ParameterDescriptionDefault value
Min GC contentMin GC content value in percents.20%
Max GC contentMax GC content value in percents.40%
Min lengthMinimum length of a region.50bp
Max lengthMaximum length of a region.1000bp

 

Parameters in Schema File

Type: find-gc

ParameterParameter in the GUIType
region-startMin GC contentnumeric
region-endMax GC contentnumeric
min-lenMin lengthnumeric
max-lenMax lengthnumeric
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