Parses information, added to variations by SnpEff, into standard annotations.
Element type: convert-snpeff-variations-to-annotations
Parameters
| Parameter | Description | Default value | Parameter in Workflow File | Type |
|---|---|---|---|---|
| Output file | Location of output data file. If this attribute is set, slot "Location" in port will not be used. | url-out | string | |
| Document format | Document format of the output file. | genbank | document-format | string |
Input/Output Ports
The element has 1 input ports:
Name in GUI: Input file URL
Name in Workflow File: in-variations-url
Slots:
| Slot In GUI | Slot in Workflow File | Type |
|---|---|---|
| Source URL | url | string |