Searches regions in a sequence with GC content in the specified range.
Parameters in GUI
| Parameter | Description | Default value |
|---|---|---|
| Min GC content | Min GC content value in percents. | 20% |
| Max GC content | Max GC content value in percents. | 40% |
| Min length | Minimum length of a region. | 50bp |
| Max length | Maximum length of a region. | 1000bp |
Parameters in Schema File
Type: find-gc
| Parameter | Parameter in the GUI | Type |
|---|---|---|
| region-start | Min GC content | numeric |
| region-end | Max GC content | numeric |
| min-len | Min length | numeric |
| max-len | Max length | numeric |