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Writes all supplied alignments to file(s) in selected format.

Parameters in GUI

ParameterDescriptionDefault value
Output file (required)Location of the output data file. If this parameter is set, then the “Location” slot is not taken into account. 
Existing fileIf a target file already exists, you can specify how it should be handled: either overwritten, renamed or appended (if supported by file format).Rename
Document formatFormat of the output file.clustal

Parameters in Workflow File

Type: write-msa

ParameterParameter in the GUIType
url-outOutput filestring
write-modeExisting file

numeric

Available values are:

  • 0 - for overwrite
  • 1 - for append
  • 2 - for rename
document-formatDocument format

string

Available values are:

  • clustal
  • mega
  • msf
  • sam
  • srfasta
  • stockholm

Input/Output Ports

The element has 1 input port:

Name in GUI: Multiple sequence alignment

Name in Workflow File: in-msa

Slots:

Slot In GUISlot in Workflow FileType
MSAmsamsa
Locationurlstring
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