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Writes all supplied sequences to file(s) in selected format.

Parameters in GUI

ParameterDescriptionDefault value
Output file (required)Location of the output data file. If this attribute is set, then the “Location” slot is not taken into account. 
Existing fileIf a target file already exists, you can specify how it should be handled: either overwritten, renamed or appended (if supported by file format).Rename
Document formatFormat of the output file.fasta
Accumulate objectsAccumulates all incoming data in one file or creates separate files for each input. In the latter case, an incremental numerical suffix is added to a file name.True

Parameters in Workflow File

Type: write-sequence

ParameterParameter in the GUIType
url-outOutput filestring
write-modeExisting file

numeric

Available values are:

  • 0 - for overwrite
  • 1 - for append
  • 2 - for rename
document-formatDocument format

string

Available values are:

  • fasta
  • fastq
  • genbank
  • raw
accumulateAccumulate objectsboolean

Input/Output Ports

The element has 1 input port:

Name in GUI: Sequence

Name in Workflow File: in-sequence

Slots:

Slot In GUISlot in Workflow FileType
Sequencesequencesequence
Locationurlstring
Set of annotationsannotationsannotation-table-list
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