Given a list of genes, using Bioconductor (GO, GOstats) and DAVID at NIH.
Parameters in GUI
| Parameter | Description | Default value |
|---|---|---|
| Output directory | The directory to store Conduct GO results. | |
| Title | Title is used to name the output files - so make it meaningful. | Default |
| Gene Universe | Select a gene universe. | hgu133a.db |
Parameters in Workflow File
Type: conduct-go-id
| Parameter | Parameter in the GUI | Type |
|---|---|---|
| output-dir | Output directory | string |
| title | Title | string |
| gene-universe | Gene Universe | string |
Input/Output Ports
The element has 1 input port:
Name in GUI: Conduct GO data
Name in Workflow File: in-data
Slots:
| Slot In GUI | Slot in Workflow File | Type |
|---|---|---|
| Target genes | in-ann | ann-table-list |