Skip to content
Skip to breadcrumbs
Skip to header menu
Skip to action menu
Skip to quick search
Linked Applications
Loading…
Spaces
Hit enter to search
Help
Online Help
Keyboard Shortcuts
Feed Builder
What’s new
What’s new
Available Gadgets
About Confluence
Log in
Sign up
Unipro UGENE User Manual v. 38
Pages
Blog
Page tree
Browse pages
Configure
Space tools
View Page
A
t
tachments (10)
Page History
Page Information
View in Hierarchy
View Source
Export to PDF
Export to Word
Dashboard
…
Unipro UGENE User Manual v. 38
Unipro UGENE User Manual
Workflow Designer
Introduction
How to Use Sample Workflows
Page Information
Title:
How to Use Sample Workflows
Author:
Yuliya Algaer
Mar 12, 2021
Last Changed by:
Yuliya Algaer
Mar 12, 2021
Tiny Link:
(useful for email)
https://doc.ugene.net/wiki/x/ugKXAw
Export As:
Word
·
PDF
Incoming Links
Unipro UGENE User Manual v. 38 (53)
Page:
Extract Consensus as Sequence
Page:
Find Patterns
Page:
Get Unmappet Reads
Page:
Parallel NGS Reads Classification
Page:
ChIP-seq Analysis with Cistrome Tools
Page:
Align Sequences with MUSCLE
Page:
Filter out Short Sequences
Page:
Group Primer Pairs
Page:
De novo Assemble Illumina PE Reads
Page:
RNA-Seq Analysis with TopHat and StringTie
Page:
Raw DNA-Seq Data Processing
Page:
Remote BLASTing
Page:
Convert Alignments to ClustalW
Page:
Convert Sequence to Genbank
Page:
De novo Assemble Illumina PE and Nanopore Reads
Page:
Find Substrings in Sequences
Page:
Search Sequences with Profile HMM
Page:
Build HMM from Alignment and test it
Page:
Intersect Annotations
Page:
ChIP-Seq Coverage
Page:
De Novo Assembly and Contigs Classification
Page:
Marking by Length
Page:
Search for TFBS
Page:
Quality Control by FastQC
Page:
RNA-seq Analysis with Tuxedo Tools
Page:
Trim and Align Sanger Reads
Page:
Search for Inverted Repeats
Page:
Raw ChIP-Seq Data Processing
Page:
Serial NGS Reads Classification
Page:
Extract Coverage from Assembly
Page:
In Silico PCR Sample
Page:
FASTQ Trimmer
Page:
Dump Sequence Info
Page:
CASAVA FASTQ Filter
Page:
De novo Assemble Illumina SE Reads
Page:
Gene-by-gene Approach for Characterization of Genomes
Page:
Get Amino Translations of a Sequence
Page:
Filter Sequence That Match a Pattern
Page:
Marking by Annotation Number
Page:
Variant Calling and Effect Prediction
Page:
Variation Annotation with SnpEff
Page:
Merge Sequences and Shift Corresponding Annotations
Page:
Extract Transcript Sequences
Page:
Raw RNA-Seq Data Processing
Page:
Convert seq-qual Pair to FASTQ
Page:
LinkData Fetch
Page:
Merge Sequences and Annotations
Page:
Search for Transcription Factor Binding Sites (TFBS) in Genomic Sequences
Page:
Convert UQL Schema Results to Alignment
Page:
Extract Consensus from Assembly
Page:
Call Variants with SAMtools
Page:
Quality Filter
Page:
Extract Consensus as Text
Hierarchy
Parent Page
Page:
Introduction
Labels
There are no labels assigned to this page.
Recent Changes
Time
Editor
Mar 12, 2021 12:27
Yuliya Algaer
View Page History
Outgoing Links
Unipro UGENE User Manual v. 38 (4)
Page:
Workflow Samples
Page:
About the Workflow Designer
Page:
Workflow Designer Window Components
Page:
Launching Workflow Designer
Overview
Content Tools
{"serverDuration": 145, "requestCorrelationId": "cad1d1314e1d4984"}